Doniach, Sebastian : rechercher sur Z-Library

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1

Understanding Nucleic Acid–Ion Interactions

Lipfert, Jan, Doniach, Sebastian, Das, Rhiju, Herschlag, Daniel

Journal:

Annual Review of Biochemistry

Année:

2014

Langue:

english

Fichier:

PDF, 1.58 MB

english, 2014

2

Coexistence of antiferromagnetism and superconductivity in a mean-field theory of high-T_{c} superconductors

Inui, Masahiko, Doniach, Sebastian, Hirschfeld, Peter, Ruckenstein, Andrei

Journal:

Physical Review B

Année:

1988

Langue:

english

Fichier:

PDF, 359 KB

english, 1988

3

Toward the mechanism of dynamical couplings and translocation in hepatitis C virus NS3 helicase using elastic network model

Wenjun Zheng, Jung-Chi Liao, Bernard R. Brooks, Sebastian Doniach

Journal:

Proteins: Structure, Function, and Bioinformatics

Année:

2007

Langue:

english

Fichier:

PDF, 520 KB

english, 2007

4

Polarized x-ray absorption edge spectroscopy of single-crystal copper(II) complexes

Smith, Teres A., Penner-Hahn, James E., Berding, Martha A., Doniach, Sebastian, Hodgson, Keith O.

Journal:

Journal of the American Chemical Society

Année:

1985

Langue:

english

Fichier:

PDF, 1.50 MB

english, 1985

5

Josephson current in graphene: Role of unconventional pairing symmetries

Linder, Jacob, Black-Schaffer, Annica M., Yokoyama, Takehito, Doniach, Sebastian, Sudbø, Asle

Journal:

Physical Review B

Année:

2009

Langue:

english

Fichier:

PDF, 1.32 MB

english, 2009

6

Enhanced electron pairing in a lattice of Berry-phase molecules

Manini, Nicola, Tosatti, Erio, Doniach, Sebastian

Journal:

Physical Review B

Année:

1995

Langue:

english

Fichier:

PDF, 567 KB

english, 1995

7

superconductors

Inui, Masahiko, Doniach, Sebastian, Hirschfeld, Peter J., Ruckenstein, Andrei E.

Journal:

Physical Review B

Année:

1989

Fichier:

PDF, 15 KB

1989

8

Biological Physics: Energy, Information, Life Biological Physics: Energy, Information, Life , Philip Nelson (with the assistance of Marko Radosavljević and Sarina Bromberg ) W. H. Freeman, New York, 2003. $92.00 (598 pp.). ISBN 0-7167-4372-8

Doniach, Sebastian

Journal:

Année:

2004

Langue:

english

Fichier:

PDF, 114 KB

english, 2004

9

Multiple time step diffusive Langevin dynamics for proteins

Peter Eastman, Sebastian Doniach

Journal:

Proteins: Structure, Function, and Bioinformatics

Année:

1998

Langue:

english

Fichier:

PDF, 292 KB

english, 1998

10

ChemInform Abstract: Changes in Biomolecular Conformation Seen by Small Angle X-Ray Scattering

Sebastian Doniach

Journal:

Année:

2001

Fichier:

PDF, 24 KB

2001

11

Long-time overdamped Langevin dynamics of molecular chains

Niels Grønbech-jensen, Sebastian Doniach

Journal:

Journal of Computational Chemistry

Année:

1994

Langue:

english

Fichier:

PDF, 1.36 MB

english, 1994

12

Prediction of the association state of insulin using spectral parameters

Vladimir N. Uversky, Liza Nielsen Garriques, Ian S. Millett, Sven Frokjaer, Jens Brange, Sebastian Doniach, Anthony L. Fink

Journal:

Journal of Pharmaceutical Sciences

Année:

2003

Langue:

english

Fichier:

PDF, 332 KB

english, 2003

13

Observation of an electric quadrupole transition in the X-ray absorption spectrum of a Cu(II) complex

James E. Hahn, Robert A. Scott, Keith O. Hodgson, Sebastian Doniach, Sylvia R. Desjardins, Edward I. Solomon

Journal:

Chemical Physics Letters

Année:

1982

Langue:

english

Fichier:

PDF, 279 KB

english, 1982

14

Quantum frustration and magnetic ordering in a Hubbard model

Marc Gabay, Sebastian Doniach, Masahiko Inui

Journal:

Physica C: Superconductivity

Année:

1988

Langue:

english

Fichier:

PDF, 128 KB

english, 1988

15

A repulsive field: advances in the electrostatics of the ion atmosphere

Vincent B Chu, Yu Bai, Jan Lipfert, Daniel Herschlag, Sebastian Doniach

Journal:

Current Opinion in Chemical Biology

Année:

2008

Langue:

english

Fichier:

PDF, 707 KB

english, 2008

16

Natively unfolded C-terminal domain of caldesmon remains substantially unstructured after the effective binding to calmodulin

Sergei E. Permyakov, Ian S. Millett, Sebastian Doniach, Eugene A. Permyakov, Vladimir N. Uversky

Journal:

Proteins: Structure, Function, and Bioinformatics

Année:

2003

Langue:

english

Fichier:

PDF, 129 KB

english, 2003

17

A computer model to dynamically simulate protein folding: Studies with crambin

Charles Wilson, Sebastian Doniach

Journal:

Proteins: Structure, Function, and Bioinformatics

Année:

1989

Langue:

english

Fichier:

PDF, 1.40 MB

english, 1989

18

Computer simulation of antibody binding specificity

Matteo Pellegrini, Dr. Sebastian Doniach

Journal:

Proteins: Structure, Function, and Bioinformatics

Année:

1993

Langue:

english

Fichier:

PDF, 842 KB

english, 1993

19

Ginzburg–Landau Theory and HighTcSuperconductivity

Sebastian Doniach

Journal:

Journal of Superconductivity and Novel Magnetism

Année:

2006

Langue:

english

Fichier:

PDF, 117 KB

english, 2006

20

Simulations of the thermodynamic properties of a short polyalanine peptide using potentials of mean force

Matteo Pellegrini, Niels Grønbech-Jensen, Sebastian Doniach

Journal:

Physica A: Statistical Mechanics and its Applications

Année:

1997

Langue:

english

Fichier:

PDF, 573 KB

english, 1997

21

10.1038/75132

Herschlag, Daniel, Russell, Rick, Millett, Ian S., Doniach, Sebastian

Journal:

Natural Structural Biology

Année:

2000

Langue:

english

Fichier:

PDF, 387 KB

english, 2000

22

10.1038/9329

Baker, David, Plaxco, Kevin W., Millett, Ian S., Segel, Daniel J., Doniach, Sebastian

Journal:

Natural Structural Biology

Année:

1999

Langue:

english

Fichier:

PDF, 474 KB

english, 1999

23

ATP-independent reversal of a membrane protein aggregate by a chloroplast SRP subunit

Jaru-Ampornpan, Peera, Shen, Kuang, Lam, Vinh Q, Ali, Mona, Doniach, Sebastian, Jia, Tony Z, Shan, Shu-ou

Journal:

Nature Structural and Molecular Biology

Année:

2010

Langue:

english

Fichier:

PDF, 797 KB

english, 2010

24

Association of partially-folded intermediates of staphylococcal nuclease induces structure and stability

Vladimir N. Uversky, Anthony L. Fink, Ritu Khurana, Anton S. Karnoup, Daniel J. Segel, Sebastian Doniach

Journal:

Protein Science

Année:

1999

Langue:

english

Fichier:

PDF, 597 KB

english, 1999

25

Small-Angle X-Ray Scattering from RNA, Proteins, and Protein Complexes

Lipfert, Jan, Doniach, Sebastian

Journal:

Annual Review of Biophysics and Biomolecular Structure

Année:

2007

Langue:

english

Fichier:

PDF, 588 KB

english, 2007

26

Size and Shape of Detergent Micelles Determined by Small-Angle X-ray Scattering

Lipfert, Jan, Columbus, Linda, Chu, Vincent B., Lesley, Scott A., Doniach, Sebastian

Journal:

Journal of Physical Chemistry B

Année:

2007

Langue:

english

Fichier:

PDF, 436 KB

english, 2007

27

Network of Dynamically Important Residues in the Open/Closed Transition in Polymerases Is Strongly Conserved

Wenjun Zheng, Bernard R. Brooks, Sebastian Doniach, D. Thirumalai

Journal:

Année:

2005

Langue:

english

Fichier:

PDF, 705 KB

english, 2005

28

The Complete VS Ribozyme in Solution Studied by Small-Angle X-Ray Scattering

Jan Lipfert, Jonathan Ouellet, David G. Norman, Sebastian Doniach, David M.J. Lilley

Journal:

Année:

2008

Langue:

english

Fichier:

PDF, 1.03 MB

english, 2008

29

Protein dynamics simulations from nanoseconds to microseconds

Sebastian Doniach, Peter Eastman

Journal:

Current Opinion in Structural Biology

Année:

1999

Langue:

english

Fichier:

PDF, 962 KB

english, 1999

30

Partially Folded States of Proteins: Characterization by X-ray Scattering

Sebastian Doniach, Jehanne Bascle, Thomas Garel, Henri Orland

Journal:

Journal of Molecular Biology

Année:

1995

Langue:

english

Fichier:

PDF, 458 KB

english, 1995

31

A Lysozyme Folding Intermediate Revealed by Solution X-ray Scattering

Lingling Chen, Keith O. Hodgson, Sebastian Doniach

Journal:

Journal of Molecular Biology

Année:

1996

Langue:

english

Fichier:

PDF, 243 KB

english, 1996

32

Kinetics of lysozyme refolding: structural characterization of a non-specifically collapsed state using time-resolved X-ray scattering

Lingling Chen, Gudrun Wildegger, Thomas Kiefhaber, Keith O Hodgson, Sebastian Doniach

Journal:

Journal of Molecular Biology

Année:

1998

Langue:

english

Fichier:

PDF, 324 KB

english, 1998

33

Anion-induced folding of Staphylococcal nuclease: characterization of multiple equilibrium partially folded intermediates

Vladimir N Uversky, Anton S Karnoup, Daniel J Segel, Sangita Seshadri, Sebastian Doniach, Anthony L Fink

Journal:

Journal of Molecular Biology

Année:

1998

Langue:

english

Fichier:

PDF, 410 KB

english, 1998

34

Characterization of transient intermediates in lysozyme folding with time-resolved small-angle X-ray scattering

Daniel J. Segel, Annett Bachmann, James Hofrichter, Keith O. Hodgson, Sebastian Doniach, Thomas Kiefhaber

Journal:

Journal of Molecular Biology

Année:

1999

Langue:

english

Fichier:

PDF, 285 KB

english, 1999

35

Solution structural studies and low-resolution model of the Schizosaccharomyces pombe sap1 protein

Michael Bada, Dirk Walther, Benoı̂t Arcangioli, Sebastian Doniach, Marc Delarue

Journal:

Journal of Molecular Biology

Année:

2000

Langue:

english

Fichier:

PDF, 398 KB

english, 2000

36

Distribution of molecular size within an unfolded state ensemble using small-angle X-ray scattering and pulse field gradient NMR techniques

Wing-Yiu Choy, Frans A.A. Mulder, Karin A. Crowhurst, D.R. Muhandiram, Ian S. Millett, Sebastian Doniach, Julie D. Forman-Kay, Lewis E. Kay

Journal:

Journal of Molecular Biology

Année:

2002

Langue:

english

Fichier:

PDF, 2.10 MB

english, 2002

37

Protein structure prediction constrained by solution X-ray scattering data and structural homology identification

Wenjun Zheng, Sebastian Doniach

Journal:

Journal of Molecular Biology

Année:

2002

Langue:

english

Fichier:

PDF, 367 KB

english, 2002

38

Blue form of bacteriorhodopsin and its order-disorder transition during dehydration

Soichi Wakatsuki, Yoshiaki Kimura, Walther Stoeckenius, Nanna Gillis, David Eliezer, Keith O. Hodgson, Sebastian Doniach

Journal:

Biochimica et Biophysica Acta (BBA) - Bioenergetics

Année:

1994

Langue:

english

Fichier:

PDF, 664 KB

english, 1994

39

Principles of RNA Compaction: Insights from the Equilibrium Folding Pathway of the P4-P6 RNA Domain in Monovalent Cations

Keiji Takamoto, Rhiju Das, Qin He, Sebastian Doniach, Michael Brenowitz, Daniel Herschlag, Mark R. Chance

Journal:

Journal of Molecular Biology

Année:

2004

Langue:

english

Fichier:

PDF, 829 KB

english, 2004

40

Protein Misfolding and Amyloid Formation for the Peptide GNNQQNY from Yeast Prion Protein Sup35: Simulation by Reaction Path Annealing

Jan Lipfert, Joel Franklin, Fang Wu, Sebastian Doniach

Journal:

Journal of Molecular Biology

Année:

2005

Langue:

english

Fichier:

PDF, 374 KB

english, 2005

41

How Large is an α-Helix? Studies of the Radii of Gyration of Helical Peptides by Small-angle X-ray Scattering and Molecular Dynamics

Bojan Zagrovic, Guha Jayachandran, Ian S. Millett, Sebastian Doniach, Vijay S. Pande

Journal:

Journal of Molecular Biology

Année:

2005

Langue:

english

Fichier:

PDF, 485 KB

english, 2005

42

Mis-translation of a Computationally Designed Protein Yields an Exceptionally Stable Homodimer: Implications for Protein Engineering and Evolution

Gautam Dantas, Alexander L. Watters, Bradley M. Lunde, Ziad M. Eletr, Nancy G. Isern, Toby Roseman, Jan Lipfert, Sebastian Doniach, Martin Tompa, Brian Kuhlman, Barry L. Stoddard, Gabriele Varani, Dav

Journal:

Journal of Molecular Biology

Année:

2006

Langue:

english

Fichier:

PDF, 1.15 MB

english, 2006

43

Structural Transitions and Thermodynamics of a Glycine-Dependent Riboswitch from Vibrio cholerae

Jan Lipfert, Rhiju Das, Vincent B. Chu, Madhuri Kudaravalli, Nathan Boyd, Daniel Herschlag, Sebastian Doniach

Journal:

Journal of Molecular Biology

Année:

2007

Langue:

english

Fichier:

PDF, 1.49 MB

english, 2007

44

The Ligand-Free State of the TPP Riboswitch: A Partially Folded RNA Structure

Mona Ali, Jan Lipfert, Soenke Seifert, Daniel Herschlag, Sebastian Doniach

Journal:

Journal of Molecular Biology

Année:

2010

Langue:

english

Fichier:

PDF, 2.39 MB

english, 2010

45

Effects of nitration on the structure and aggregation of α-synuclein

Vladimir N. Uversky, Ghiam Yamin, Larissa A. Munishkina, Mikhail A. Karymov, Ian S. Millett, Sebastian Doniach, Yuri L. Lyubchenko, Anthony L. Fink

Journal:

Molecular Brain Research

Année:

2005

Langue:

english

Fichier:

PDF, 1.17 MB

english, 2005

46

The Fastest Global Events in RNA Folding: Electrostatic Relaxation and Tertiary Collapse of the Tetrahymena Ribozyme

Rhiju Das, Lisa W. Kwok, Ian S. Millett, Yu Bai, Thalia T. Mills, Jaby Jacob, Gregory S. Maskel, Soenke Seifert, Simon G.J. Mochrie, P. Thiyagarajan, Sebastian Doniach, Lois Pollack, Daniel Herschlag

Journal:

Journal of Molecular Biology

Année:

2003

Langue:

english

Fichier:

PDF, 867 KB

english, 2003

47

Closing the Folding Chamber of the Eukaryotic Chaperonin Requires the Transition State of ATP Hydrolysis

Anne S. Meyer, Joel R. Gillespie, Dirk Walther, Ian S. Millet, Sebastian Doniach, Judith Frydman

Journal:

Année:

2003

Langue:

english

Fichier:

PDF, 693 KB

english, 2003

48

Long single α-helical tail domains bridge the gap between structure and function of myosin VI

Spink, Benjamin J, Sivaramakrishnan, Sivaraj, Lipfert, Jan, Doniach, Sebastian, Spudich, James A

Journal:

Nature Structural and Molecular Biology

Année:

2008

Langue:

english

Fichier:

PDF, 688 KB

english, 2008

49

Redistribution of Terbium Ions Across Acetylcholine Receptor-Enriched Membranes Induced by Agonist Desensitization

Lee, Thomas E., Chuang, Anthony R., Marek, Matthew S., Doniach, Sebastian, Fairclough, Robert H.

Journal:

Biophysical Journal

Année:

2009

Langue:

english

Fichier:

PDF, 738 KB

english, 2009

50

Combining Single Molecule Optical Trapping and Small Angle X-Ray Scattering Measurements to Compute the Persistence Length of a Protein Alpha-Helix

Sivaramakrishnan, Sivaraj, Sommese, Ruth, Sung, Jong Min, Ali, Mona, Doniach, Sebastian, Flyvbjerg, Henrik, Spudich, James A.

Journal:

Biophysical Journal

Année:

2010

Langue:

english

Fichier:

PDF, 34 KB

english, 2010